Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs6793150 chr3:48351560 G/A 3.27E-5 523 39.62 41.27 19.13 KM Plot
KIRC rs6793239 chr3:48351618 G/T 3.27E-5 523 39.62 41.27 19.13 KM Plot
KIRC rs6796343 chr3:48282021 C/A 7.51E-5 519 39.53 41.27 19.13 KM Plot
KIRC rs68118663 chr6:50815367 C/T 5.17E-6 519 40.5 40.3 15.3 KM Plot
KIRC rs68149500 chr6:26111271 C/T 1.1E-8 513 42.33 36.87 3.37 KM Plot
KIRC rs68194335 chr6:25866243 A/T 1.74E-5 521 41.13 33.93 4.1 KM Plot
KIRC rs6845460 chr4:186313511 C/T 9.18E-7 524 3.53 38.45 39.23 KM Plot
KIRC rs6902556 chr6:2380055 A/G 1.86E-6 527 15.55 39.17 40 KM Plot
KIRC rs6908220 chr6:20288694 G/A 9.0E-9 525 9.02 35.77 43.3 KM Plot
KIRC rs6919295 chr6:20274032 T/C 1.13E-5 522 14.37 35.7 43.68 KM Plot
KIRC rs6927283 chr6:20279338 A/C 9.09E-9 518 9.02 36.1 43.68 KM Plot
KIRC rs6927325 chr6:20279067 G/T 1.07E-8 521 9.02 35.83 43.68 KM Plot
KIRC rs6934301 chr6:165351179 T/A 4.05E-5 523 15.83 41.53 39.38 KM Plot
KIRC rs6939997 chr6:25821224 C/T 2.13E-5 527 41.73 31.53 4.1 KM Plot
KIRC rs6940835 chr6:20274662 A/G 1.07E-8 521 9.02 35.83 43.68 KM Plot